Saya mencoba menginstal paket python rpy2dengan pip install di Ubuntu 16.04:
pip install rpy2==2.2.7tetapi dapatkan pesan kesalahan (lihat hasil lengkap di bawah):
Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-build-EuOI6K/unroll/Hal yang sama terjadi dengan paket lain, suka pip install unroll, atau menggunakan pip2. Saya pikir posting ini adalah masalah yang sama, tetapi di sana bisa diselesaikan dengan menggunakan sudo.
Solusi dicoba
Aku mencoba solusi dalam posting , seperti: pip install --upgrade setuptools, (sudo) easy_install -U setuptools, atau sudo apt-get install python-setuptools, tetapi tidak berhasil.
info python / pip
Seseorang menyarankan saya mungkin memiliki instalasi python / pip yang aneh, berikut adalah beberapa info:
sudo which python pip pip2 | xargs -rd '\n' readlink -f
/usr/bin/python2.7
/usr/local/bin/pip
/usr/local/bin/pip2
sudo python --version
Python 2.7.12
sudo pip --version
pip 9.0.1 from /home/matifou/.local/lib/python2.7/site-packages (python 2.7)
/usr/bin/pip2 --version
pip 8.1.1 from /usr/lib/python2.7/dist-packages (python 2.7)
ls -l $(which pip); dpkg -S /usr/bin/pip
-rwxr-xr-x 1 root root 204 Nov 8 16:24 /usr/local/bin/pip
python-pip: /usr/bin/pipOutput kesalahan penuh
pip install rpy2 == 2.2.7
Mengumpulkan rpy2 == 2.2.7 Menggunakan rpy2-2.2.7.tar.gz yang di-cache
Output lengkap dari perintah python setup.py egg_info:
menjalankan egg_info
membuat pip-egg-info / rpy2.egg-info
menulis pip-egg-info / rpy2.egg-info / PKG-INFO
menulis nama tingkat atas ke pip-egg-info / rpy2.egg-info / top_level.txt
menulis dependency_links ke pip-egg-info / rpy2.egg-info / dependency_links.txt
menulis file manifes 'pip-egg-info / rpy2.egg-info / SOURCES.txt'
Traceback (panggilan terakhir terakhir):
File "", baris 1, dalam
File "/tmp/pip-build-EkrbmM/rpy2/setup.py", baris 462, di
[os.path.join ('doc', 'source', 'rpy2_logo.png')])],
File "/usr/lib/python2.7/distutils/core.py", baris 151, dalam pengaturan
dist.run_commands ()
File "/usr/lib/python2.7/distutils/dist.py", baris 953, di run_commands
self.run_command (cmd)
File "/usr/lib/python2.7/distutils/dist.py", baris 972, di run_command
cmd_obj.run ()
File "/usr/local/lib/python2.7/dist-packages/setuptools/command/egg_info.py",
baris 280, sedang dijalankan
self.find_sources ()
File "/usr/local/lib/python2.7/dist-packages/setuptools/command/egg_info.py",
baris 295, di find_sources
mm.run ()
File "/usr/local/lib/python2.7/dist-packages/setuptools/command/egg_info.py",
baris 526, sedang dijalankan
self.add_defaults ()
File "/usr/local/lib/python2.7/dist-packages/setuptools/command/egg_info.py",
baris 562, di add_defaults
sdist.add_defaults (mandiri)
File "/usr/local/lib/python2.7/dist-packages/setuptools/command/py36compat.py",
baris 36, di add_defaults
self._add_defaults_ext ()
File "/usr/local/lib/python2.7/dist-packages/setuptools/command/py36compat.py",
baris 119, dalam _add_defaults_ext
build_ext = self.get_finalized_command ('build_ext')
File "/usr/lib/python2.7/distutils/cmd.py", baris 312, di get_finalized_command
cmd_obj.ensure_finalized ()
File "/usr/lib/python2.7/distutils/cmd.py", baris 109, di sure_finalized
self.finalize_options ()
File "/tmp/pip-build-EkrbmM/rpy2/setup.py", baris 155, di finalize_options
config + = get_rconfig (r_home, tentang)
File "/tmp/pip-build-EkrbmM/rpy2/setup.py", baris 319, di get_rconfig
rc = RConfig.from_string (rconfig, allow_empty = allow_empty)
File "/tmp/pip-build-EkrbmM/rpy2/setup.py", baris 279, di from_string
+ '\ nin string \ n' + string)
ValueError: Substring tidak valid
-fopenmp
dalam string
-Wl, - ekspor-dinamis -fopenmp -Wl, -Bsymbolic-functions -Wl, -z, relro -L / usr / lib / R / lib -lR -lpcre -llzma -lbz2 -lz -lrt -ldl -lm
Perintah "python setup.py egg_info" gagal dengan kode kesalahan 1 di / tmp / pip-build-EkrbmM / rpy2 /
pip instal buka gulungan
Mengumpulkan unroll Menggunakan cached unroll-0.1.0.tar.gz
Output lengkap dari perintah python setup.py egg_info:
Mengunduh http://pypi.python.org/packages/source/d/distribute/distribute-0.6.14.tar.gz
Traceback (panggilan terakhir terakhir):
File "", baris 1, dalam
File "/tmp/pip-build-QimGjp/unroll/setup.py", baris 2, di
ez_setup.use_setuptools ()
File "/usr/local/lib/python2.7/dist-packages/ez_setup.py", baris 145, di use_setuptools
return _do_download (versi, download_base, to_dir, download_delay)
File "/usr/local/lib/python2.7/dist-packages/ez_setup.py", baris 124, di _do_download
to_dir, download_delay)
File "/usr/local/lib/python2.7/dist-packages/ez_setup.py", baris 193, di download_setuptools
src = urlopen (url)
File "/usr/lib/python2.7/urllib2.py", baris 154, di urlopen
return opener.open (url, data, timeout)
File "/usr/lib/python2.7/urllib2.py", baris 435, terbuka
response = meth (req, response)
File "/usr/lib/python2.7/urllib2.py", baris 548, di http_response
'http', permintaan, tanggapan, kode, msg, hdrs)
File "/usr/lib/python2.7/urllib2.py", baris 473, salah
return self._call_chain (* args)
File "/usr/lib/python2.7/urllib2.py", baris 407, di _call_chain
hasil = func (* args)
File "/usr/lib/python2.7/urllib2.py", baris 556, di http_error_default
meningkatkan HTTPError (req.get_full_url (), kode, msg, hdrs, fp)
urllib2.HTTPError: Kesalahan HTTP 403: SSL diperlukan
Perintah "python setup.py egg_info" gagal dengan kode kesalahan 1 di tmp / pip-
build-QimGjp / unroll /
Apakah R sudah diinstal?
—
lapisdecor
Coba jalankan dengan
—
George Udosen
-Hbendera sepertisudo -H
Maaf, tetapi ini terlalu berantakan bagi saya untuk merasa seperti membantu seseorang melepaskannya saat ini. Bahkan dengan hadiahnya. Terima kasih atas pengingat Anda.
—
David Foerster
Terima kasih @ George, tapi sayangnya bahkan karena
—
Matifou
sudo -Hitu tidak berfungsi :-(